Package Bio :: Package config :: Module FormatRegistry
[show private | hide private]
[frames | no frames]

Module Bio.config.FormatRegistry

Implements a Registry to store Martel-type format expressions.

Classes: FormatRegistry Holds Biopython formats in a dictionary-like interface. FormatObject Describes a Biopython file format. FormatGroup Describes a group of Biopython file formats.
Classes
FormatGroup This object holds a group of FormatObjects.
FormatObject This object stores Biopython file formats and provides methods to work on them.
FormatRegistry This implements a dictionary-like interface to Biopython file formats.

Variable Summary
FormatRegistry formats = formats, exporting 'blast', 'blastn', 'blastp'...

Variable Details

formats

Type:
FormatRegistry
Value:
formats, exporting 'blast', 'blastn', 'blastp', 'blastx', 'embl', 'emb\
l/65', 'empty', 'fasta', 'genbank', 'genbank-records', 'genbank-releas\
e', 'ipi', 'ncbi-blastn', 'ncbi-blastp', 'ncbi-blastx', 'ncbi-tblastn'\
, 'ncbi-tblastx', 'search', 'sequence', 'swissprot', 'swissprot/38', '\
swissprot/40', 'tblastn', 'tblastx', 'wu-blastn', 'wu-blastp', 'wu-bla\
stx'                                                                   

Generated by Epydoc 2.1 on Thu Jun 30 22:05:36 2005 http://epydoc.sf.net