Package Bio :: Package expressions :: Module fasta
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Module Bio.expressions.fasta

Function Summary
  make_1id(s, dbname, name)
  make_2id(s, dbname, primary_name, secondary_name)

Variable Summary
MaxRepeat comment_lines = <Martel.Expression.MaxRepeat instance at...
HeaderFooter format = <Martel.Expression.HeaderFooter instance at 0x2...
Group generic_term = <Martel.Expression.Group instance at 0x2a...
Seq gnl_id = <Martel.Expression.Seq instance at 0x2aaaae00ce...
Alt id_term = <Martel.Expression.Alt instance at 0x2aaaadac3...
list ids = [<Martel.Expression.Seq instance at 0x2aaaadabee18...
Seq ncbi_term = <Martel.Expression.Seq instance at 0x2aaaada...
Group ncbi_word = <Martel.Expression.Group instance at 0x2aaaa...
Group record = <Martel.Expression.Group instance at 0x2aaaadad...
Seq seqline = <Martel.Expression.Seq instance at 0x2aaaadac3...
Seq seqline_nonewline = <Martel.Expression.Seq instance at 0...
Group sequence = <Martel.Expression.Group instance at 0x2aaaad...
Seq title = <Martel.Expression.Seq instance at 0x2aaaadac3cb...

Variable Details

comment_lines

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x2aaaadac38c0>               

format

Type:
HeaderFooter
Value:
<Martel.Expression.HeaderFooter instance at 0x2aaaadad73b0>            

generic_term

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaadac36c8>                   

gnl_id

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x2aaaae00cea8>                     

id_term

Type:
Alt
Value:
<Martel.Expression.Alt instance at 0x2aaaadac3758>                     

ids

Type:
list
Value:
[<Martel.Expression.Seq instance at 0x2aaaadabee18>,
 <Martel.Expression.Seq instance at 0x2aaaada93758>,
 <Martel.Expression.Seq instance at 0x2aaaada93710>,
 <Martel.Expression.Seq instance at 0x2aaaadffb7a0>,
 <Martel.Expression.Seq instance at 0x2aaaadffb440>,
 <Martel.Expression.Seq instance at 0x2aaaadffbea8>,
 <Martel.Expression.Seq instance at 0x2aaaae00c3b0>,
 <Martel.Expression.Seq instance at 0x2aaaae00c6c8>,
...                                                                    

ncbi_term

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x2aaaadac3560>                     

ncbi_word

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaadac33b0>                   

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaadad7290>                   

seqline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x2aaaadac3ef0>                     

seqline_nonewline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x2aaaadad7098>                     

sequence

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaadad71b8>                   

title

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x2aaaadac3cb0>                     

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