Package Bio :: Package MEME :: Module Parser :: Class MASTRecord
[show private | hide private]
[frames | no frames]

Class MASTRecord


The class for holding the results from a MAST run.

A MASTRecord holds data about matches between motifs and sequences.
The motifs held by the MASTRecord are objects of the class MEMEMotif.

Methods:
get_motif_matches_for_sequence(sequence_name): returns all of the
    motif matches within a given sequence. The matches are objects of
    the class MEME.Motif.Instance
get_motif_matches (motif_name): returns all of the matches for a motif
    in the sequences searched. The matches returned are of class 
    MEME.Motif.Instance
get_motif_by_name (motif_name): returns a MEMEMotif with the given
    name.

Method Summary
  __init__(self)
  get_motif_by_name(self, name)
  get_motif_matches(self, motif)
  get_motif_matches_for_sequence(self, seq)

Generated by Epydoc 2.1 on Wed Jan 31 09:58:02 2007 http://epydoc.sf.net