Nexus
Classes
Block
CharBuffer
Commandline
Nexus
StepMatrix
Exceptions
NexusError
Functions
_adjust_lines
_compact4nexus
_kill_comments_and_break_lines
_make_unique
_replace_parenthesized_ambigs
_seqmatrix2strmatrix
_sort_keys_by_values
combine
get_start_end
quotestrip
safename
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