Class FormatConverter
Convert between different alignment representation formats.
The basic idea behind the converter is that it takes a given format,
converts it into the base Alignment class, and then can return an object
in any other supported format with the info from the basal alignment.
Supported formats are: o Clustal format (*.aln) o Fasta format
(*.fasta)
Method Summary |
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__init__ (self,
to_convert)
Initialize a converter with a given object. |
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to_clustal (self)
Convert the current info into a ClustalAlignment object. |
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to_fasta (self)
Convert the current info into a FastaAlignment object. |
__init__(self,
to_convert)
(Constructor)
Initialize a converter with a given object.
Arguments: o to_convert - The class which we are going to be
converting.
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to_clustal(self)
Convert the current info into a ClustalAlignment object.
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to_fasta(self)
Convert the current info into a FastaAlignment object.
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