Package Bio :: Package Emboss :: Module Applications
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Module Bio.Emboss.Applications

Code to interact with and run various EMBOSS programs.

These classes follow the AbstractCommandline interfaces for running programs.
Classes
EConsenseCommandline Commandline object for the econsense program from EMBOSS.
EInvertedCommandline Commandline object for the einverted program from EMBOSS.
ENeighborCommandline Commandline object for the eneighbor program from EMBOSS.
EProtDistCommandline Commandline object for the eprotdist program from EMBOSS.
EProtParsCommandline Commandline object for the eprotpars program from EMBOSS.
ESeqBootCommandline Commandline object for the eseqboot program from EMBOSS.
Est2GenomeCommandline Commandline object for the est2genome program from EMBOSS.
ETandemCommandline Commandline object for the etandem program from EMBOSS.
FuzznucCommandline Commandline object for the fuzznuc program from EMBOSS.
PalindromeCommandline Commandline object for the palindrome program from EMBOSS.
Primer3Commandline Commandline object for the Primer3 interface from EMBOSS.
PrimerSearchCommandline Commandline object for the primersearch program from EMBOSS.
TranalignCommandline Commandline object for the tranalign program from EMBOSS.
WaterCommandline Commandline object for the water program from EMBOSS.

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