fastx_toolkit-0.0.14-36.fc41 RPM for aarch64

From Fedora Rawhide for aarch64 / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(aarch-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• ld-linux-aarch64.so.1()(64bit)
• ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPL-3.0-or-later

Changelog

* Wed Jul 17 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-36
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild
* Sun Apr 21 2024 Miroslav Suchý <msuchy@redhat.com> - 0.0.14-35
  - convert license to SPDX
* Wed Jan 24 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/23
/usr/lib/.build-id/23/18c90dcf9fe80b29e2e85c501e0b0d52c45d9c
/usr/lib/.build-id/42
/usr/lib/.build-id/42/f209fc465ee0775d6eb6f9ca2351170c92c653
/usr/lib/.build-id/79
/usr/lib/.build-id/79/5e063cf9967b5cad28307b640f8c0840770f88
/usr/lib/.build-id/7a
/usr/lib/.build-id/7a/a4313b9d092e974b6c34332020d47277d23c80
/usr/lib/.build-id/84
/usr/lib/.build-id/84/5d59be17261e97e6e1919549fb418a64bdf0d2
/usr/lib/.build-id/84/9960c1c7194504ae26f2101e06c711601f1e8f
/usr/lib/.build-id/99
/usr/lib/.build-id/99/793a9e8b14d5d96f9564996d0503d5793ad7d4
/usr/lib/.build-id/b3
/usr/lib/.build-id/b3/a074b1c2406ba0415134c09ab40f2c7000dfa0
/usr/lib/.build-id/bf
/usr/lib/.build-id/bf/a94fa955f40283be4b75f47f5b378ab0affc88
/usr/lib/.build-id/c0
/usr/lib/.build-id/c0/97364a12dcc6ab1490342683258de2e332c6a0
/usr/lib/.build-id/c4
/usr/lib/.build-id/c4/90a3bb4631870fb4a3abce122bede809453948
/usr/lib/.build-id/c9
/usr/lib/.build-id/c9/3e8f1eda1ac43ade579fb109258d6bfce51712
/usr/lib/.build-id/ce
/usr/lib/.build-id/ce/45571c39855d7a6b8fb973f6d91e97a41434f4
/usr/lib/.build-id/ef
/usr/lib/.build-id/ef/81dd5d3de00334d40720e9c4aa1c7d4219c0cf
/usr/lib/.build-id/fe
/usr/lib/.build-id/fe/684ece34d01d7631adee8f2e0e7333f2a7870e
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Wed Jan 22 00:59:45 2025