bowtie-1.3.1-7.fc42 RPM for ppc64le

From Fedora Rawhide for ppc64le / b

Bowtie, an ultrafast, memory-efficient short read aligner for short
DNA sequences (reads) from next-gen sequencers. Please cite: Langmead
B, et al. Ultrafast and memory-efficient alignment of short DNA
sequences to the human genome. Genome Biol 10:R25.

Provides

• bowtie
• bowtie(ppc-64)
• bundled(tiny-thread)

Requires

• /usr/bin/bash
• /usr/bin/perl
• /usr/bin/python3
• /usr/bin/sh
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.33)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.17)(64bit)
• libm.so.6(GLIBC_2.27)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.15)(64bit)
• libstdc++.so.6(CXXABI_1.3.2)(64bit)
• libstdc++.so.6(CXXABI_1.3.8)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.22)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• libz.so.1()(64bit)
• libz.so.1(ZLIB_1.2.0.2)(64bit)
• libz.so.1(ZLIB_1.2.3.3)(64bit)
• libz.so.1(ZLIB_1.2.3.5)(64bit)
• python3
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1

License

Artistic-2.0 AND Zlib

Changelog

* Thu Jan 16 2025 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.1-7
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild
* Wed Aug 07 2024 Miroslav Suchý <msuchy@redhat.com> - 1.3.1-6
  - convert license to SPDX
* Wed Jul 17 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.1-5
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild
* Tue Jan 23 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.1-4
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.1-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.1-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Fri Feb 17 2023 Jun Aruga <jaruga@redhat.com> - 1.3.1-1
  - Update to upstream release 1.3.1
    Resolves: rhbz#2003918
* Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-6
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

Files

/usr/bin/bowtie
/usr/bin/bowtie-align-l
/usr/bin/bowtie-align-l-debug
/usr/bin/bowtie-align-s
/usr/bin/bowtie-align-s-debug
/usr/bin/bowtie-build
/usr/bin/bowtie-build-l
/usr/bin/bowtie-build-l-debug
/usr/bin/bowtie-build-s
/usr/bin/bowtie-build-s-debug
/usr/bin/bowtie-inspect
/usr/bin/bowtie-inspect-l
/usr/bin/bowtie-inspect-l-debug
/usr/bin/bowtie-inspect-s
/usr/bin/bowtie-inspect-s-debug
/usr/lib/.build-id
/usr/lib/.build-id/09
/usr/lib/.build-id/09/cee5e1f8db9ce6adef46cc2b3fb94153c1a4fb
/usr/lib/.build-id/0e
/usr/lib/.build-id/0e/972bb253613ce6c8cc780e94bff6cef6c4dfcf
/usr/lib/.build-id/1c
/usr/lib/.build-id/1c/b18e8b3c7ac3cf4301e52b293dd32b801351b1
/usr/lib/.build-id/29
/usr/lib/.build-id/29/be74335e5d82598d72ea7c87d651cab4cddb1b
/usr/lib/.build-id/4c
/usr/lib/.build-id/4c/6b2c1b6f9a8dcd0c1b4404a3ee98c828b351eb
/usr/lib/.build-id/58
/usr/lib/.build-id/58/a185ce53da24ccd2c673d1471367d4c2adf8b0
/usr/lib/.build-id/62
/usr/lib/.build-id/62/0978fa285c47ce4206a81acb15ba86d640a22b
/usr/lib/.build-id/67
/usr/lib/.build-id/67/47d837de88151a838772ef4dfc932057902385
/usr/lib/.build-id/a7
/usr/lib/.build-id/a7/066751a3c28ad2d09a76f7cc57f0d142481dd8
/usr/lib/.build-id/ca
/usr/lib/.build-id/ca/09f09d1e88c7e9a43570f2aa2c3b0f4f1ae642
/usr/lib/.build-id/e2
/usr/lib/.build-id/e2/eccb4fc4ec8c54a6b4689ad041e3b53dbf7213
/usr/lib/.build-id/ef
/usr/lib/.build-id/ef/6ed05b0b7f738e60da06c66aefe2233dc8b3c7
/usr/share/bowtie
/usr/share/bowtie/genomes
/usr/share/bowtie/genomes/NC_008253.fna
/usr/share/bowtie/indexes
/usr/share/bowtie/indexes/e_coli.1.ebwt
/usr/share/bowtie/indexes/e_coli.2.ebwt
/usr/share/bowtie/indexes/e_coli.3.ebwt
/usr/share/bowtie/indexes/e_coli.4.ebwt
/usr/share/bowtie/indexes/e_coli.README
/usr/share/bowtie/indexes/e_coli.rev.1.ebwt
/usr/share/bowtie/indexes/e_coli.rev.2.ebwt
/usr/share/bowtie/reads
/usr/share/bowtie/reads/e_coli_1000.fa
/usr/share/bowtie/reads/e_coli_1000.fq
/usr/share/bowtie/reads/e_coli_1000.raw
/usr/share/bowtie/reads/e_coli_10000snp.fa
/usr/share/bowtie/reads/e_coli_10000snp.fq
/usr/share/bowtie/reads/e_coli_1000_1.fa
/usr/share/bowtie/reads/e_coli_1000_1.fq
/usr/share/bowtie/reads/e_coli_1000_2.fa
/usr/share/bowtie/reads/e_coli_1000_2.fq
/usr/share/bowtie/reads/e_coli_1000_interleaved.fq
/usr/share/bowtie/scripts
/usr/share/bowtie/scripts/best_verify.pl
/usr/share/bowtie/scripts/bowtie-hbb.sh
/usr/share/bowtie/scripts/bs_mapability.pl
/usr/share/bowtie/scripts/build_test.sh
/usr/share/bowtie/scripts/colorize_fasta.pl
/usr/share/bowtie/scripts/colorize_fastq.pl
/usr/share/bowtie/scripts/convert_quals.pl
/usr/share/bowtie/scripts/fastq_to_tabbed.pl
/usr/share/bowtie/scripts/gen_2b_occ_lookup.pl
/usr/share/bowtie/scripts/gen_dnamasks2colormask.pl
/usr/share/bowtie/scripts/gen_occ_lookup.pl
/usr/share/bowtie/scripts/gen_solqual_lookup.pl
/usr/share/bowtie/scripts/infer_fraglen.pl
/usr/share/bowtie/scripts/make_a_thaliana_tair.sh
/usr/share/bowtie/scripts/make_b_taurus_UMD3.sh
/usr/share/bowtie/scripts/make_c_elegans.sh
/usr/share/bowtie/scripts/make_canFam2.sh
/usr/share/bowtie/scripts/make_d_melanogaster.sh
/usr/share/bowtie/scripts/make_e_coli.sh
/usr/share/bowtie/scripts/make_galGal3.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi36.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi37.sh
/usr/share/bowtie/scripts/make_hg18.sh
/usr/share/bowtie/scripts/make_hg19.sh
/usr/share/bowtie/scripts/make_m_musculus_ncbi37.sh
/usr/share/bowtie/scripts/make_mm8.sh
/usr/share/bowtie/scripts/make_mm9.sh
/usr/share/bowtie/scripts/make_rn4.sh
/usr/share/bowtie/scripts/make_s_cerevisiae.sh
/usr/share/bowtie/scripts/mapability.pl
/usr/share/bowtie/scripts/pe_verify.pl
/usr/share/bowtie/scripts/reconcile_alignments.pl
/usr/share/bowtie/scripts/reconcile_alignments_pe.pl
/usr/share/bowtie/scripts/run-hbb.sh
/usr/share/doc/bowtie
/usr/share/doc/bowtie/AUTHORS
/usr/share/doc/bowtie/MANUAL
/usr/share/doc/bowtie/NEWS
/usr/share/doc/bowtie/TUTORIAL
/usr/share/doc/bowtie/VERSION
/usr/share/doc/bowtie/manual.html
/usr/share/doc/bowtie/style.css
/usr/share/licenses/bowtie
/usr/share/licenses/bowtie/LICENSE

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Fabrice Bellet, Sat Feb 22 05:12:51 2025