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Name: staden-io_lib | Distribution: Fedora Project |
Version: 1.14.8 | Vendor: Fedora Project |
Release: 5.fc42 | Build date: Sun Jan 19 12:42:55 2025 |
Group: Unspecified | Build host: buildvm-ppc64le-07.iad2.fedoraproject.org |
Size: 3246292 | Source RPM: staden-io_lib-1.14.8-5.fc42.src.rpm |
Packager: Fedora Project | |
Url: http://staden.sourceforge.net | |
Summary: General purpose library to handle gene sequencing machine trace files |
The Staden I/O library provides a general purpose interface for reading and writing trace files and other bioinformatics experiment files. The programmer simply calls, for example, the read_reading function to create a "Read" C structure with the data loaded into memory. It has been compiled and tested on a variety of Unix systems, MacOS X and MS Windows.
MIT
* Sun Jan 19 2025 Fedora Release Engineering <releng@fedoraproject.org> - 1.14.8-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild * Sat Jul 20 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.14.8-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild * Sat Jan 27 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.14.8-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Sat Jul 22 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.14.8-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Thu Feb 02 2023 Christian Iseli <christian.iseli@epfl.ch> 1.14.8-1 - new upstream 1.14.8 - so_version bumped to 11 * Thu Feb 02 2023 Jonathan Wakely <jwakely@redhat.com> - 1.12.4-26 - Patched for C99 compatibility * Sat Jan 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.12.4-25 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
/usr/bin/append_sff /usr/bin/convert_trace /usr/bin/cram_dump /usr/bin/cram_index /usr/bin/cram_size /usr/bin/extract_fastq /usr/bin/extract_qual /usr/bin/extract_seq /usr/bin/get_comment /usr/bin/hash_exp /usr/bin/hash_extract /usr/bin/hash_list /usr/bin/hash_sff /usr/bin/hash_tar /usr/bin/index_tar /usr/bin/makeSCF /usr/bin/scf_dump /usr/bin/scf_info /usr/bin/scf_update /usr/bin/scram_flagstat /usr/bin/scram_merge /usr/bin/scram_pileup /usr/bin/scram_test /usr/bin/scramble /usr/bin/srf2fasta /usr/bin/srf2fastq /usr/bin/srf_dump_all /usr/bin/srf_extract_hash /usr/bin/srf_extract_linear /usr/bin/srf_filter /usr/bin/srf_index_hash /usr/bin/srf_info /usr/bin/srf_list /usr/bin/trace_dump /usr/bin/ztr_dump /usr/lib/.build-id /usr/lib/.build-id/09 /usr/lib/.build-id/09/c5982588c4c941bf32e8803b5cf19d7c9054bf /usr/lib/.build-id/16 /usr/lib/.build-id/16/c47a3fddea195bec09adc50adf10a1d173e4f2 /usr/lib/.build-id/23 /usr/lib/.build-id/23/e08d693a00c8bbbf1999fe5f93523f7d33e330 /usr/lib/.build-id/25 /usr/lib/.build-id/25/7457309a8f6f594d941244aca5e030fed2ee00 /usr/lib/.build-id/43 /usr/lib/.build-id/43/607fadeb2a081342a50d26053180a891d229fa /usr/lib/.build-id/48 /usr/lib/.build-id/48/533467fae87b9d16237fb1e3c81bec292d8bc3 /usr/lib/.build-id/4e /usr/lib/.build-id/4e/478de9c93ea55170f9b61fde82000b7adbaf4f /usr/lib/.build-id/53 /usr/lib/.build-id/53/661d3c4781b054a51d08fd7ba09850b6680a6f /usr/lib/.build-id/5a /usr/lib/.build-id/5a/825c6859b2d393c9c1906327f0d08695eb0b21 /usr/lib/.build-id/63 /usr/lib/.build-id/63/6f0422ad77da6b01244e3e7684148dc88b686a /usr/lib/.build-id/63/dafce6620f74f65c8795bab27e4965292f1c8d /usr/lib/.build-id/70 /usr/lib/.build-id/70/d661437373fd4029599d9a2e227e267fdc6a6b /usr/lib/.build-id/72 /usr/lib/.build-id/72/9aadce096394399165bd551d36132db74ec8bb /usr/lib/.build-id/73 /usr/lib/.build-id/73/64b6bfe267cb917defa3607d7a20392142f73d /usr/lib/.build-id/77 /usr/lib/.build-id/77/21dcf0923ee58641c4ff41ab746ba45b4bc78c /usr/lib/.build-id/7d /usr/lib/.build-id/7d/5e323f3374e37a8eb4def1f92be3ab7054b485 /usr/lib/.build-id/7f /usr/lib/.build-id/7f/c3385db7d6f028b42f8beb4e3da4e5a0c3bc8f /usr/lib/.build-id/80 /usr/lib/.build-id/80/20000fbd44bf2fc9532091e62a3f52b63b8a19 /usr/lib/.build-id/83 /usr/lib/.build-id/83/2a958080ac1ed647526e2255dc7e35d3365ba5 /usr/lib/.build-id/85 /usr/lib/.build-id/85/39983b0440f42cf590ffa5fbac71eb0ccb6f6f /usr/lib/.build-id/85/a6783b03b766d640cc2d8a9843982a8e4b591d /usr/lib/.build-id/86 /usr/lib/.build-id/86/6bb27807989b223e1d91f366ab63e53fa98cb2 /usr/lib/.build-id/88 /usr/lib/.build-id/88/9e5a23cca8f6870f55c72259364831323e088d /usr/lib/.build-id/8e /usr/lib/.build-id/8e/3a844e0549233156f5419efdecede20a62c428 /usr/lib/.build-id/95 /usr/lib/.build-id/95/258995c4174111e59fc1bb1532ba654430269b /usr/lib/.build-id/9b /usr/lib/.build-id/9b/aed477c8efba790f7c3af06ae98ea5b117ec57 /usr/lib/.build-id/a3 /usr/lib/.build-id/a3/97eed1f6416956c24fcc1bd7cecea73a7d877a /usr/lib/.build-id/a4 /usr/lib/.build-id/a4/0742633233bad63bc24443eb2c6eb5d833fdd8 /usr/lib/.build-id/ce /usr/lib/.build-id/ce/9ab3f76929e4dede3c8244e2cf0c1d8791a686 /usr/lib/.build-id/cf /usr/lib/.build-id/cf/dc608eb9a4496632ef40d28de998e179581ade /usr/lib/.build-id/d8 /usr/lib/.build-id/d8/0babf9326e07112f6b9170fa88e31e0dfb874c /usr/lib/.build-id/d8/64c738c7666ada25bc0f2507a8d26e393d220f /usr/lib/.build-id/dc /usr/lib/.build-id/dc/40a2ed13496efbafc91c3494522c8e3ce96391 /usr/lib/.build-id/de /usr/lib/.build-id/de/9c5ed12ab1356aa54d430e112be7a1ef3dd43c /usr/lib/.build-id/f0 /usr/lib/.build-id/f0/56ae61125a328806de28e05ec08c75c62a84e1 /usr/lib/.build-id/fb /usr/lib/.build-id/fb/525805f1344113fbd6c732c2f69947c589daa5 /usr/lib64/libstaden-read.so.11 /usr/lib64/libstaden-read.so.11.0.6 /usr/share/doc/staden-io_lib /usr/share/doc/staden-io_lib/CHANGES /usr/share/doc/staden-io_lib/COPYRIGHT /usr/share/doc/staden-io_lib/README /usr/share/doc/staden-io_lib/docs /usr/share/doc/staden-io_lib/docs/Hash_File_Format /usr/share/doc/staden-io_lib/docs/ZTR_format /usr/share/man/man1/scramble.1.gz /usr/share/man/man1/srf2fasta.1.gz /usr/share/man/man1/srf2fastq.1.gz /usr/share/man/man1/srf_index_hash.1.gz /usr/share/man/man1/srf_info.1.gz /usr/share/man/man1/srf_list.1.gz
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Fabrice Bellet, Sun Feb 23 04:37:30 2025