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| Name: python311-zarr | Distribution: openSUSE Tumbleweed |
| Version: 3.1.5 | Vendor: openSUSE |
| Release: 1.2 | Build date: Mon Dec 22 13:39:00 2025 |
| Group: Unspecified | Build host: reproducible |
| Size: 3645088 | Source RPM: python-zarr-3.1.5-1.2.src.rpm |
| Packager: http://bugs.opensuse.org | |
| Url: https://github.com/zarr-developers/zarr-python | |
| Summary: An implementation of chunked, compressed, N-dimensional arrays for Python | |
An implementation of chunked, compressed, N-dimensional arrays for Python.
MIT
* Mon Dec 22 2025 Ben Greiner <code@bnavigator.de>
- Update to 3.1.5
* See the v3 migration guide for a listing of what's changed
since v2
https://zarr.readthedocs.io/en/stable/user-guide/v3_migration/
* For a more complete list of bugfixes see
https://zarr.readthedocs.io/en/stable/release-notes/
[#]# Features
* The Array class can now also be parametrized in the same manner
as the AsyncArray class, allowing Zarr format v2 and v3 Arrays
to be distinguished. New types have been added to zarr.types to
help with this. (#3304)
* Adds zarr.experimental.cache_store.CacheStore, a Store that
implements caching by combining two other Store instances. See
the docs page for more information about this feature. (#3366)
* Adds a zarr.experimental module for unstable user-facing
features. (#3490)
* Add a array.target_shard_size_bytes to zarr.config to allow
users to set a maximum number of bytes per-shard when
shards="auto" in, for example, zarr.create_array. (#3547)
* Make async_array on the zarr.Array class public (_async_array
will remain untouched, but its stability is not guaranteed).
(#3556)
* Add a command-line interface to migrate v2 Zarr metadata to v3.
Corresponding functions are also provided under zarr.metadata.
(#1798)
* Add obstore implementation of delete_dir. (#3310)
* Adds a registry for chunk key encodings for extensibility. This
allows users to implement a custom ChunkKeyEncoding, which can
be registered via register_chunk_key_encoding or as an entry
point under zarr.chunk_key_encoding. (#3436)
* Trying to open a group at a path where an array already exists
now raises a helpful error. (#3444)
* Added support for async vectorized and orthogonal indexing.
(#3083)
* Make config param optional in init_array (#3391)
* Add lightweight implementations of .getsize() and
.getsize_prefix() for ObjectStore. (#3227)
* Ensure that invocations of create_array use consistent keyword
arguments, with consistent defaults.
* Added public API for Buffer ABCs and implementations.
* Adds zarr-specific data type classes.
* Added NDBuffer.empty method for faster ndbuffer initialization.
(#3191)
* Add an alternate from_array_metadata_and_store constructor to
CodecPipeline. (#3233)
* Add zarr.storage.FsspecStore.from_mapper() so that zarr.open()
supports stores of type fsspec.mapping.FSMap. (#2774)
* Implemented move for LocalStore and ZipStore. This allows users
to move the store to a different root path. (#3021)
* Added zarr.errors.GroupNotFoundError, which is raised when
attempting to open a group that does not exist. (#3066)
* Adds fill_value to the list of attributes displayed in the
output of the AsyncArray.info() method. (#3081)
* Use numpy.zeros instead of np.full for a performance speedup
when creating a zarr.core.buffer.NDBuffer with fill_value=0.
(#3082)
* Port more stateful testing actions from Icechunk. (#3130)
* Adds a with_read_only convenience method to the Store abstract
base class (raises NotImplementedError) and implementations to
the MemoryStore, ObjectStore, LocalStore, and FsspecStore
classes. (#3138)
* Added a print_debug_info function for bug reports. (#2913)
* Add experimental ObjectStore storage class based on obstore.
(#1661)
* Add zarr.from_array using concurrent streaming of source data
(#2622)
* Adds functions for concurrently creating multiple arrays and
groups. (#2665)
* Improves performance of FsspecStore.delete_dir for remote
filesystems supporting concurrent/batched deletes, e.g., s3fs.
(#2661)
* Added zarr.config.enable_gpu to update Zarr's configuration to
use GPUs. (#2751)
* Avoid reading chunks during writes where possible. #757 (#2784)
* LocalStore learned to delete_dir. This makes array and group
deletes more efficient. (#2804)
* Add zarr.testing.strategies.array_metadata to generate
ArrayV2Metadata and ArrayV3Metadata instances. (#2813)
* Add arbitrary shards to Hypothesis strategy for generating
arrays. (#2822)
* Test getsize() and getsize_prefix() in StoreTests. (#2693)
* Test that a ValueError is raised for invalid byte range syntax
in StoreTests. (#2693)
* Separate instantiating and opening a store in StoreTests.
(#2693)
* Add a test for using Stores as a context managers in
StoreTests. (#2693)
* Implemented LogingStore.open(). (#2693)
* LoggingStore is now a generic class. (#2693)
* Change StoreTest's test_store_repr, test_store_supports_writes,
test_store_supports_partial_writes, and
test_store_supports_listing to to be implemented using
@abstractmethod, rather raising NotImplementedError. (#2693)
* Test the error raised for invalid buffer arguments in
StoreTests. (#2693)
* Test that data can be written to a store that's not yet open
using the store.set method in StoreTests. (#2693)
* Adds a new function init_array for initializing an array in
storage, and refactors create_array to use init_array.
create_array takes two new parameters: data, an optional
array-like object, and write_data, a bool which defaults to
True. If data is given to create_array, then the dtype and
shape attributes of data are used to define the corresponding
attributes of the resulting Zarr array. Additionally, if data
given and write_data is True, then the values in data will be
written to the newly created array. (#2761)
* Implement zarr.from_array using concurrent streaming (#2622).
[#]# Deprecations and Removals
* Removes default chunk encoding settings (filters, serializer,
compressors) from the global configuration object.
* Removes support for passing keyword-only arguments positionally
to the following functions and methods: save_array, open,
group, open_group, create, get_basic_selection,
set_basic_selection, get_orthogonal_selection,
set_orthogonal_selection, get_mask_selection,
set_mask_selection, get_coordinate_selection,
set_coordinate_selection, get_block_selection,
set_block_selection, Group.create_array, Group.empty,
Group.zeroes, Group.ones, Group.empty_like, Group.full,
Group.zeros_like, Group.ones_like, Group.full_like, Group.array
- Remove zarr-numcodecs-zstd-test.patch
* Thu Mar 06 2025 Ben Greiner <code@bnavigator.de>
- Update to 2.18.4
* Add Python 3.13, drop Python 3.10 by @dstansby in #2344
* Exclude bad version of numcodecs & fix bsddb3 doctests by
@dstansby in #2544
- We do not dare to upgrade to Zarr 3 yet
* https://zarr.dev/blog/zarr-python-3-release/
* Wed Sep 25 2024 Ben Greiner <code@bnavigator.de>
- Update to 2.18.3
* Update TEAM.md by @jhamman in #2071
* [v2] Fix doctests with numpy 2.0 by @dstansby in #2073
* Fix version number in built docs by @dstansby in #2044
* Fix orthogonal indexing with a scalar by @dcherian in #1947
* [v2] Drop support for Python 3.9 by @dstansby in #2074
* Fix Array.array for numpy 2.1 by @dstansby in #2106
* Bump test version of numcodecs by @dstansby in #2114
* fix: numpy 1.24 compat for Array.array by @jhamman in #2123
* Deprecate N5Store by @jhamman in #2103
* Run tests on numpy 1.23 by @dstansby in #2124
* chore: bump minimum numpy version to 1.24 by @jhamman in #2127
- Revert the numpy1 restriction
- Add zarr-numcodecs-zstd-test.patch:
* Allow older numcodecs < 0.13 in zstd tests
* Overrides gh#zarr-developers/zarr-python#2114
* Mon Sep 23 2024 ecsos <ecsos@opensuse.org>
- Fix build error and use numpy1
* Sat Jun 29 2024 Dirk Müller <dmueller@suse.com>
- update to 2.18.2:
* Add Zstd codec to old V3 code path.
* Fix a regression when getting or setting a single value from
arrays with size-1 chunks.
* Wed May 08 2024 Dirk Müller <dmueller@suse.com>
- update to 2.18.0:
* Performance improvement for reading and writing chunks if any
of the dimensions is size 1.
* Enable ruff/bugbear rules (B) and fix issues.
* Minor updates to use np.inf instead of np.PINF / np.NINF in
preparation for NumPy 2.0.0 release.
* Deprecate experimental v3 support by issuing a FutureWarning.
Also updated docs to warn about using the experimental v3
version.
* Deprecate the following stores:
:class:`zarr.storage.DBMStore`,
:class:`zarr.storage.LMDBStore`,
:class:`zarr.storage.SQLiteStore`,
:class:`zarr.storage.MongoDBStore`,
:class:`zarr.storage.RedisStore`, and
:class:`zarr.storage.ABSStore`. These stores are slated to be
removed from Zarr-Python in version 3.0.
* Sat Apr 20 2024 Dirk Müller <dmueller@suse.com>
- update to 2.17.2:
* [v3] Dramatically reduce number of __contains__ requests in
favor of optimistically calling __getitem__ and handling any
error that may arise.
* [v3] Reuse the downloaded array metadata when creating an
Array.
* Optimize Array.info so that it calls getsize only once.
* Override IPython _repr_*_ methods to avoid expensive lookups
against object stores.
* FSStore now raises rather than return bad data.
* Add CI test environment for Python 3.12
* Bump minimum supported NumPy version to 1.23 (per spec 0000)
* Sat Mar 16 2024 Ben Greiner <code@bnavigator.de>
- Update to 2.17.1
* Change occurrences of % and format() to f-strings. By Dimitri
Papadopoulos Orfanos #1423.
* Proper argument for numpy.reshape. By Dimitri Papadopoulos
Orfanos #1425.
* Add typing to dimension separator arguments. By David Stansby
[#1620].
- Release 2.17.0
* Added type hints to zarr.creation.create(). By David Stansby
[#1536].
* Pyodide support: Don’t require fasteners on Emscripten. By Hood
Chatham #1663.
* Fri Jan 19 2024 Daniel Garcia <daniel.garcia@suse.com>
- skip broken tests in s390x, gh#zarr-developers/zarr-python#1375
bsc#1218611
* Wed Dec 27 2023 Dirk Müller <dmueller@suse.com>
- update to 2.16.1:
* Require ``setuptools_scm`` version ``1.5.4``\+
* Add ``docs`` requirements to ``pyproject.toml``
* Fixed caching issue in ``LRUStoreCache``.
* Tue Aug 01 2023 Markéta Machová <mmachova@suse.com>
- update to version 2.16
* Migrate to pyproject.toml and remove redundant infrastructure.
* Require setuptools 64.0.0+
* Bump to NumPy 1.20+ in environment.yml.
* More maintenance changes, special thanks to Outreachy participants
for contributing to most of the maintenance PRs.
* Improve Zarr V3 support, adding partial store read/write and
storage transformers.
* N5 nows supports Blosc. Remove warnings emitted when using N5Store
or N5FSStore with a blosc-compressed array.
* Implement more extensive fallback of getitem/setitem for
orthogonal indexing.
* Getitems supports meta_array.
* Allow for partial codec specification in V3 array metadata.
* Implemented blockwise (chunk blocks) indexing to zarr.Array.
* Thu Jul 27 2023 Dirk Müller <dmueller@suse.com>
- set python311 context for SLE15
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